#!/usr/bin/env bats # generated on 2022-11-02T20:59:12Z load bats-extra load bats-jq @test 'empty strands' { #[[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "", "strand2": "" } END_INPUT assert_success expected=0 assert_equal "$output" "$expected" } @test 'single letter identical strands' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "A", "strand2": "A" } END_INPUT assert_success expected=0 assert_equal "$output" "$expected" } @test 'single letter different strands' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "G", "strand2": "T" } END_INPUT assert_success expected=1 assert_equal "$output" "$expected" } @test 'long identical strands' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "GGACTGAAATCTG", "strand2": "GGACTGAAATCTG" } END_INPUT assert_success expected=0 assert_equal "$output" "$expected" } @test 'long different strands' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "GGACGGATTCTG", "strand2": "AGGACGGATTCT" } END_INPUT assert_success expected=9 assert_equal "$output" "$expected" } @test 'disallow first strand longer' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "AATG", "strand2": "AAA" } END_INPUT assert_failure expected='strands must be of equal length' assert_equal "$output" "$expected" } @test 'disallow second strand longer' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "ATA", "strand2": "AGTG" } END_INPUT assert_failure expected='strands must be of equal length' assert_equal "$output" "$expected" } @test 'disallow empty first strand' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "", "strand2": "G" } END_INPUT assert_failure expected='strands must be of equal length' assert_equal "$output" "$expected" } @test 'disallow empty second strand' { [[ $BATS_RUN_SKIPPED == "true" ]] || skip run jq -r -f hamming.jq << 'END_INPUT' { "strand1": "G", "strand2": "" } END_INPUT assert_failure expected='strands must be of equal length' assert_equal "$output" "$expected" }